Taxon DOI
10.1601/tx.5109
Name
Ash et al. 1994 emend. Huang et al. 2017
Taxonomic Rank
genus
Methodology
Nomenclatural Taxonomy [1980-2016]
Incertae sedis taxa are placed using SOSCC (Garrity and Lilburn 2008)
 
Parent
Taxon RecordName Record
De Vos et al. 2010
Members
(Prazmowski 1880) Ash et al. 1994
Huang et al. 2015
Hwang and Ghim 2017
Li et al. 2016
Bae et al. 2010
(ex Wieringa 1941) Uetanabaro et al. 2003
Uetanabaro et al. 2003
Kim et al. 2015
Zhuang et al. 2017
(Nakamura 1987) Shida et al. 1997
Tang et al. 2011
Yoon et al. 2005
(Cheshire and Cheyne 1885) Ash et al. 1994
(Nakamura 1984) Ash et al. 1994 emend. Shida et al. 1997
Horn et al. 2005
Montes et al. 2004
(ex Katznelson 1955) Nakamura 1996
Yun et al. 2017
Simon et al. 2017
Sadaf et al. 2016
Cha et al. 2017
Saha et al. 2005
Wasoontharawat et al. 2017
Meehan et al. 2001
Siddiqi et al. 2017
(Seldin et al. 1984) Ash et al. 1994 pro synon. Paenibacillus durum (sic) (Smith and Cato 1974) Collins et al. 1994 pro synon. Paenibacillus durus corrig. (Smith and Cato 1974) Collins et al. 1994
Lee et al. 2016
Sánchez et al. 2005
Osman et al. 2006
Gao et al. 2012
Elo et al. 2001
Gao et al. 2016
von der Weid et al. 2002
Gao et al. 2013
Oh et al. 2010
Yoon et al. 1998
Valverde et al. 2008
Zhang et al. 2013
Sitdhipol et al. 2016
Lee 2016
Rivas et al. 2006
Akaracharanya et al. 2009
Kämpfer et al. 2012
Shida et al. 1997
Liu et al. 2016
Yoon et al. 2002
(Kuroshima et al. 1996) Lee et al. 2004
(Nakamura 1987) Shida et al. 1997
Park et al. 2011
Logan et al. 2004
Yokota et al. 2016
Chou et al. 2009
Logan et al. 2004
Ahn et al. 2014 non Paenibacillus cucumis Kämpfer et al. 2016
Kämpfer et al. 2016 non Paenibacillus cucumis Ahn et al. 2014
(Kanzawa et al. 1995) Shida et al. 1997
Lee et al. 2002
Dsouza et al. 2014
Zhu et al. 2015
Tcherpakov et al. 1999
Son et al. 2014
Kim et al. 2014
corrig. (Smith and Cato 1974) Collins et al. 1994
(Shelobolina et al. 1998) Hu et al. 2010
(Kuroshima et al. 1996) Lee et al. 2004
Kim et al. 2004
Carro et al. 2013
Yin et al. 2015
Guisado et al. 2016
Fang et al. 2017
Clermont et al. 2015
Velázquez et al. 2004
Cao et al. 2015
Kim et al. 2010
Chou et al. 2007
Ma and Chen 2008
Ming et al. 2012
Lim et al. 2006
Padakandla et al. 2016
Yoon et al. 2007
Kim et al. 2008
Lee et al. 2007 pro synon. Paenibacillus anaericanus Horn et al. 2005
Huq et al. 2015
Kishore et al. 2010
(Alexander and Priest 1989) Shida et al. 1997
Dasman et al. 2002
(Pichinoty et al. 1987) Ash et al. 1994 pro synon. Paenibacillus validus (Nakamura 1984) Ash et al. 1994
Keita et al. 2014
Berge et al. 2002
van der Maarel et al. 2000
Li et al. 2014
Jeon et al. 2009
Kim et al. 2015
Guo et al. 2015
Menéndez et al. 2016
Takeda et al. 2005
Kim et al. 2013
Kim and Lee 2014
Vaz-Moreira et al. 2007
Liu et al. 2010
Togo et al. 2017
Shida et al. 1997
Cho et al. 2015
Yun et al. 2017
Aguilera et al. 2001
Jin et al. 2011
(Kanzawa et al. 1995) Shida et al. 1997
Takeda et al. 2002
Im et al. 2017
Ko et al. 2008
Chung et al. 2000
Yoon et al. 2003
Siddiqi et al. 2015
Scheldeman et al. 2004
Chen et al. 2017
(White 1906) Ash et al. 1994 emend. Genersch et al. 2006
(Nakamura 1984) Heyndrickx et al. 1996
Kittiwongwattana and Thawai 2015
(Dutky 1940) Pettersson et al. 1999
Li et al. 2014
Ai et al. 2016
Carro et al. 2014
(Schardinger 1905) Ash et al. 1994
(Marshall and Ohye 1966) Ash et al. 1994
Guo et al. 2016
Lee et al. 2014
Roux and Raoult 2004
Lai et al. 2015
Šmerda et al. 2005
Madhaiyan et al. 2016
Khianngam et al. 2009
Iida et al. 2005
(Avakyan et al. 1998) Hu et al. 2010
Khianngam et al. 2009
Daane et al. 2002
Wang et al. 2016
Kämpfer et al. 2017
Enright et al. 2003
Li et al. 2015
Lee et al. 2013
Berge et al. 2002
Kim et al. 2015
Zhang et al. 2016
Zhang et al. 2017
(Nakamura 1984) Ash et al. 1994
Ten et al. 2006
Nguyen et al. 2015
Osman et al. 2006
Park et al. 2009
(Montefusco et al. 1993) Heyndrickx et al. 1996
Menéndez et al. 2016
Benardini et al. 2011
Rivas et al. 2005
Zhou et al. 2015
(sic) Moon and Kim 2014
Kim et al. 2011
Kim et al. 2010
Baek et al. 2010
Madhaiyan et al. 2017
(Dutky 1940) Pettersson et al. 1999
Han et al. 2015
Romanenko et al. 2013
Valverde et al. 2010
Roux et al. 2008
Kim et al. 2009
Wang et al. 2016
Traiwan et al. 2011
(Nakamura 1984) Ash et al. 1994
Behrendt et al. 2011
Chen et al. 2015
Xin et al. 2017
Wang et al. 2014
Gao et al. 2016
Shimoyama et al. 2014
Vaz-Moreira et al. 2010
Kämpfer et al. 2017
Zhang et al. 2015
Rivas et al. 2005
Baik et al. 2011
Beneduzi et al. 2010
Sun et al. 2015
Ma et al. 2007
Moon et al. 2011
Guo et al. 2016
Roux and Raoult 2004
Wang et al. 2012
Huang et al. 2016
Xiang et al. 2014
Yao et al. 2014
Mishra et al. 2015
Khianngam et al. 2009
Smerda et al. 2006
Jiang et al. 2015 emend. Padakandla et al. 2015
Tonouchi et al. 2014
Khianngam et al. 2009
Tohno et al. 2016
Huang et al. 2017
Chen et al. 2016
Cho et al. 2017
Liu et al. 2016
Park et al. 2007
Hong et al. 2009
Jin et al. 2011
Kim et al. 2010
Suominen et al. 2003
Guo et al. 2014
Lee et al. 2015
Lee et al. 2008
Wu et al. 2013
Lee et al. 2007
Xie et al. 2012
Wang et al. 2008
Lee et al. 2012
Yoon et al. 2003
Huang et al. 2016
Xie and Yokota 2007
Khianngam et al. 2009
Ueda et al. 2013
Zhou et al. 2013
(Nakamura 1990) Shida et al. 1997
Wu et al. 2011
Han et al. 2015
Roux and Raoult 2004
Menédez et al. 2017
Wang et al. 2013
Huang et al. 2017
Nelson et al. 2009
Bosshard et al. 2002
Kong et al. 2013
Aw et al. 2016
Behrendt et al. 2011
Roux et al. 2008
(Nakamura 1984) Ash et al. 1994
Chen et al. 2015
Glaeser et al. 2013
Gao et al. 2016
Baik et al. 2011
Lee and Yoon 2008
Zhu et al. 2015
Rodríguez-Díaz et al. 2005
Kim et al. 2015
Lim et al. 2006
Nelson et al. 2009
Tachaapaikoon et al. 2012
Rivas et al. 2005
Khianngam et al. 2011
Sukweenadhi et al. 2016
Niu et al. 2015
Ma et al. 2007
Liu et al. 2015
None 2015
CrossRef
Digital Object Identifier
https://doi.org/10.1601/tx.5109
https://doi.org/10.1601/tx.5109
Type Status
Taxonomy
The taxonomic placement of this genus within the root Universal Root.

  Woese et al. 1990
  Woese et al. 1990
  corrig. Gibbons and Murray 1978 emend. Garrity and Holt 2001
  Ludwig et al. 2010
  Prévot 1953 (Approved Lists 1980)
  De Vos et al. 2010
  Ash et al. 1994 emend. Huang et al. 2017

The taxonomy from the rank of class and below is based upon currently published taxonomic opinion. For a complete taxonomy, refer to The Taxonomic Outline of Bacteria and Archaea, Release 7.7.
Taxon Statistics
Based on the method of Garrity and Lilburn (2008).
Microbial Earth
 
Citation
When referring to this Abstract, please use its Digital Object Identifier and cite NamesforLife.
Taxon Abstract for the genus Paenibacillus Ash et al. 1994 emend. Huang et al. 2017. NamesforLife, LLC. Retrieved December 17, 2017. https://doi.org/10.1601/tx.5109.
This information was last reviewed on December 13, 2017.

References


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  2. Kittiwongwattana C, Thawai C. Paenibacillus lemnae sp. nov., an endophytic bacterium of duckweed (Lemna aequinoctialis). Int J Syst Evol Microbiol 2015; 65:107-112. https://doi.org/10.1099/ijs.0.067876-0 [PubMed].
  3. Nguyen N-L, Kim Y-J, Hoang V-A, Kang J-P, Singh P, Yang D-C. Paenibacillus panaciterrae sp. nov., isolated from ginseng-cultivated soil. Int J Syst Evol Microbiol 2015; 65:4080-4086. https://doi.org/10.1099/ijsem.0.000540 [PubMed].
  4. Ma YC, Chen SF. Paenibacillus forsythiae sp. nov., a nitrogen-fixing species isolated from rhizosphere soil of Forsythia mira. Int J Syst Evol Microbiol 2008; 58:319-323. https://doi.org/10.1099/ijs.0.65238-0 [PubMed].
  5. Hwang Y-J, Ghim S-Y. Paenibacillus aceris sp. nov., an isolate from the rhizosphere of Acer okamotoanum, a plant native to Ulleungdo Island, Republic of Korea. Int J Syst Evol Microbiol 2017; 67:1039-1045. https://doi.org/10.1099/ijsem.0.001748 [PubMed].
  6. Ma Y, Xia Z, Liu X, Chen S. Paenibacillus sabinae sp. nov., a nitrogen-fixing species isolated from the rhizosphere soils of shrubs. Int J Syst Evol Microbiol 2007; 57:6-11. https://doi.org/10.1099/ijs.0.64519-0 [PubMed].
  7. Park DS, Jeong WJ, Lee KH, Oh HW, Kim BC, Bae KS, Park HY. Paenibacillus pectinilyticus sp. nov., isolated from the gut of Diestrammena apicalis. Int J Syst Evol Microbiol 2009; 59:1342-1347. https://doi.org/10.1099/ijs.0.002261-0 [PubMed].
  8. Padakandla SR, Lee GW, Chae JC. Paenibacillus gelatinilyticus sp. nov. a psychrotolerant bacterium isolated from a reclaimed soil and amended description of Paenibacillus shenyangensis. Antonie van Leeuwenhoek 2015; 108:1197-1203. https://doi.org/10.1007/s10482-015-0574-4 [PubMed].
  9. Cho H, Heo J, Ahn J-H, Weon H-Y, Kim J-S, Kwon S-W, Kim S-J. Paenibacillus solanacearum sp. nov., isolated from rhizosphere soil of a tomato plant. Int J Syst Evol Microbiol 2017; . https://doi.org/10.1099/ijsem.0.002410 [PubMed].
  10. Park MJ, Kim HB, An DS, Yang HC, Oh ST, Chung HJ, Yang DC. Paenibacillus soli sp. nov., a xylanolytic bacterium isolated from soil. Int J Syst Evol Microbiol 2007; 57:146-150. https://doi.org/10.1099/ijs.0.64533-0 [PubMed].
  11. Bae J-Y, Kim K-Y, Kim J-H, Lee K, Cho J-C, Cha C-J. Paenibacillus aestuarii sp. nov., isolated from an estuarine wetland. Int J Syst Evol Microbiol 2010; 60:644-647. https://doi.org/10.1099/ijs.0.011544-0 [PubMed].
  12. Rivas R, Mateos PF, Martínez-Molina E, Velázquez E. Paenibacillus phyllosphaerae sp. nov., a xylanolytic bacterium isolated from the phyllosphere of Phoenix dactylifera. Int J Syst Evol Microbiol 2005; 55:743-746. https://doi.org/10.1099/ijs.0.63323-0 [PubMed].
  13. Menéndez E, Carro L, Tejedor C, Fernández-Pascual M, Martínez-Molina E, Peix A, Velázquez E. Paenibacillus hispanicus sp. nov. isolated from Triticum aestivum roots in Spain. Int J Syst Evol Microbiol 2016; 66:4628-4632. https://doi.org/10.1099/ijsem.0.001401 [PubMed].
  14. Xie CH, Yokota A. Paenibacillus terrigena sp. nov., isolated from soil. Int J Syst Evol Microbiol 2007; 57:70-72. https://doi.org/10.1099/ijs.0.64311-0 [PubMed].
  15. Madhaiyan M, Poonguzhali S, Saravanan VS, Duraipandiyan V, Al-Dhabi NA, Kwon SW, Whitman WB. Paenibacillus polysaccharolyticus sp. nov., a xylanolytic and cellulolytic bacteria isolated from leaves of Bamboo Phyllostachys aureosulcata. Int J Syst Evol Microbiol 2017; 67:2127-2133. https://doi.org/10.1099/ijsem.0.001901 [PubMed].
  16. Suominen I, Spröer C, Kämpfer P, Rainey FA, Lounatmaa K, Salkinoja-Salonen M. Paenibacillus stellifer sp. nov., a cyclodextrin-producing species isolated from paperboard. Int J Syst Evol Microbiol 2003; 53:1369-1374. https://doi.org/10.1099/ijs.0.02277-0 [PubMed].
  17. Togo AH, Khelaifia S, Lagier JC, Caputo A, Robert C, Fournier P-E, Maraninchi M, Valero R, Raoult D, Million M. Noncontiguous finished genome sequence and description of Paenibacillus ihumii sp. nov. strain AT5. New Microbes New Infect 2016; 29:142-150. https://doi.org/10.1016/j.nmni.2016.01.013 [PubMed].
  18. Zhou X, Guo GN, Wang LQ, Bai SL, Li CL, Yu R, Li YH. Paenibacillus physcomitrellae sp. nov., isolated from the moss Physcomitrella patens. Int J Syst Evol Microbiol 2015; 65:3400-3406. https://doi.org/10.1099/ijsem.0.000428 [PubMed].
  19. Cao Y, Chen F, Li Y, Wei S, Wang G. Paenibacillus ferrarius sp. nov., isolated from iron mineral soil. Int J Syst Evol Microbiol 2015; 65:165-170. https://doi.org/10.1099/ijs.0.063552-0 [PubMed].
  20. Sadaf K, Tushar L, Nirosha P, Podile AR, Sasikala Ch, Ramana ChV. Paenibacillus arachidis sp. nov., isolated from groundnut seeds. Int J Syst Evol Microbiol 2016; 66:2923-2928. https://doi.org/10.1099/ijsem.0.001124 [PubMed].
  21. Yin J, He D, Li X, Zeng X, Tian M, Cheng G. Paenibacillus enshidis sp. nov., isolated from the nodules of Robinia pseudoacacia L. Curr Microbiol 2015; 71:321-325. https://doi.org/10.1007/s00284-015-0854-2 [PubMed].
  22. Romanenko LA, Tanaka N, Svetashev VI, Kalinovskaya NI. Paenibacillus profundus sp. nov., a deep sediment bacterium that produces isocoumarin and peptide antibiotics. Arch Microbiol 2013; 195:247-254. https://doi.org/10.1007/s00203-013-0873-y [PubMed].
  23. Roux V, Fenner L, Raoult D. Paenibacillus provencensis sp. nov., isolated from human cerebrospinal fluid, and Paenibacillus urinalis sp. nov., isolated from human urine. Int J Syst Evol Microbiol 2008; 58:682-687. https://doi.org/10.1099/ijs.0.65228-0 [PubMed].
  24. Moon JC, Jung YJ, Jung JH, Jugn HS, Cheong YR, Jeon CO, Lee OK, Lee SY. Paenibacillus sacheonensis sp. nov., a xylanolytic and cellulolytic bacterium isolated from tidal flat sediment. Int J Syst Evol Microbiol 2011; 61:2753-2757. https://doi.org/10.1099/ijs.0.029066-0 [PubMed].
  25. Baik KS, Choe HN, Park SC, Kim EM, Seong CN. Paenibacillus wooponensis sp. nov., isolated from wetland freshwater. Int J Syst Evol Microbiol 2011; 61:2763-2768. https://doi.org/10.1099/ijs.0.028308-0 [PubMed].
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  29. Gao M, Yang H, Zhao J, Liu J, Sun Y-h, Wang Y-j, Sun J-g. Paenibacillus brassicae sp. nov., isolated from cabbage rhizosphere in Beijing, China. Antonie van Leeuwenhoek 2013; 103:647-653. https://doi.org/10.1007/s10482-012-9849-1 [PubMed].
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  34. Menéndez E, Ramírez-Bahena M-H, Carro L, Fernández-Pascual M, Klenk HP, Velázquez E, Mateos PF, Peix A, Scotti MR. Paenibacillus periandrae sp. nov., isolated from nodules of Periandra mediterranea. Int J Syst Evol Microbiol 2016; 66:1838-1843. https://doi.org/10.1099/ijsem.0.000953 [PubMed].
  35. Zhang L, Gao J-S, Zhang S, Sheirdil RA, Wang X-C, Zhang X-X. Paenibacillus rhizoryzae sp. nov., a novel bacterium isolated from rice rhizosphere. Int J Syst Evol Microbiol 2015; 65:3053-3059. https://doi.org/10.1099/ijs.0.000376 [PubMed].
  36. Xie J-B, Zhang L-H, Zhou Y-G, Liu H-C, Chen S-F. Paenibacillus taohuashanense sp. nov., a nitrogen-fixing species isolated from rhizosphere soil of the root of Caragana kansuensis Pojark. Antonie van Leeuwenhoek 2012; 102:735-741. https://doi.org/10.1007/s10482-012-9773-4 [PubMed].
  37. Carro L, Flores-Félix JD, Ramírez-Bahena M-H, García-Fraile P, Martínez-Hidalgo P, Igual JM, Tejedor C, Peix A, Velázquez E. Paenibacillus lupini sp. nov., isolated from nodules of Lupinus albus. Int J Syst Evol Microbiol 2014; 64:3028-3033. https://doi.org/10.1099/ijs.0.060830-0 [PubMed].
  38. Keita MB, Padhmananabhan R, Caputo A, Robert C, Delaporte E, Raoult D, Fournier P-E, Bittar F. Non-contiguous finished genome sequence and description of Paenibacillus gorillae sp. nov. Stand Genomic Sci 2014; 9:1031-1045. https://doi.org/10.4056/sigs.5189179 [PubMed].
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  40. Jiang B, Zhao X, Liu J, Fu L, Yang C, Hu X. Paenibacillus shenyangensis sp. nov., a bioflocculant-producing species isolated from soil under a peach tree. Int J Syst Evol Microbiol 2015; 65:220-224. https://doi.org/10.1099/ijs.0.060483-0 [PubMed].
  41. Bosshard PP, Zbinden R, Altwegg M. Paenibacillus turicensis sp. nov., a novel bacterium harbouring heterogeneities between 16S rRNA genes. Int J Syst Evol Microbiol 2002; 52:2241-2249. https://doi.org/10.1099/ijs.0.02105-0 [PubMed].
  42. Lee FL, Tien CJ, Wang LT, Liu YC, Chern LL. Paenibacillus taichungensis sp. nov., from soil in Taiwan. Int J Syst Evol Microbiol 2008; 58:2640-2645. https://doi.org/10.1099/ijs.0.65776-0 [PubMed].
  43. Chou JH, Chou YJ, Lin KY, Sheu SY, Sheu DS, Arun AB, Young CC, Chen WM. Paenibacillus fonticola sp. nov., isolated from a warm spring. Int J Syst Evol Microbiol 2007; 57:1346-1350. https://doi.org/10.1099/ijs.0.64872-0 [PubMed].
  44. Lee H-W, Roh SW, Yim KJ, Shin NR, Lee J, Whon TW, Kim JY, Hyun D-W, Kim D, Bae J-W. Paenibacillus marinisediminis sp. nov., a Bacterium Isolated from Marine Sediment. J Microbiol 2013; 51:312-317. https://doi.org/10.1007/s12275-013-3198-2 [PubMed].
  45. Kong BH, Liu QF, Liu M, Liu Y, Liu L, Li CL, Yu R, Li YH. Paenibacillus typhae sp. nov., isolated from roots of Typha angustifolia L. Int J Syst Evol Microbiol 2013; 63:1037-1044. https://doi.org/10.1099/ijs.0.042747-0 [PubMed].
  46. Lee JC, Yoon KH. Paenibacillus woosongensis sp. nov., a xylanolytic bacterium isolated from forest soil. Int J Syst Evol Microbiol 2008; 58:612-616. https://doi.org/10.1099/ijs.0.65350-0 [PubMed].
  47. Wasoontharawat M, Phongsopitanun W, Siriudom S, Tanasupawat S. Paenibacillus aurantiacus sp. nov., isolated from ant nest soil. Int J Syst Evol Microbiol 2017; 67:3226-3230. https://doi.org/10.1099/ijsem.0.002088 [PubMed].
  48. Aw Y-K, Ong K-S, Lee L-H, Cheow Y-L, Yule CM, Lee S-M. Newly Isolated Paenibacillus tyrfis sp. nov., from Malaysian Tropical Peat Swamp Soil with Broad Spectrum Antimicrobial Activity. Front. Microbio. 2016; 7:. https://doi.org/10.3389/fmicb.2016.00219 [PubMed].
  49. Kim H-S, Srinivasan S, Lee S-S. Paenibacillus alba nov., isolated from peat soil. Curr Microbiol 2015; 70:865-870. https://doi.org/10.1007/s00284-015-0795-9 [PubMed].
  50. Lee M, Ten LN, Baek SH, Im WT, Aslam Z, Lee ST. Paenibacillus ginsengisoli sp. nov., a novel bacterium isolated from soil of a ginseng field in Pocheon province, South Korea. Antonie van Leeuwenhoek 2007; 91:127-135. https://doi.org/10.1007/s10482-006-9102-x [PubMed].
  51. Khianngam S, Akaracharanya A, Tanasupawat S, Lee KC, Lee JS. Paenibacillus thailandensis sp. nov. and Paenibacillus nanensis sp. nov., xylanase-producing bacteria isolated from soil. Int J Syst Evol Microbiol 2009; 59:564-568. https://doi.org/10.1099/ijs.0.000406-0 [PubMed].
  52. Xin K, Li M, Chen C, Yang X, Li Q, Cheng J, Zhang L, Shen X. Paenibacillus qinlingensis sp. nov., an indole-3-acetic acid-producing bacterium isolated from roots of Sinopodophyllum hexandrum (Royle) Ying. Int J Syst Evol Microbiol 2017; 67:589-595. https://doi.org/10.1099/ijsem.0.001666 [PubMed].
  53. Zhuang J, Xin D, Zhang Y-Q, Guo J, Zhang J. Paenibacillus albidus sp. nov., isolated from grassland soil. Int J Syst Evol Microbiol 2017; 67:4685-4691. https://doi.org/10.1099/ijsem.0.002356 [PubMed].
  54. Wu X, Fang H, Qian C, Wen Y, Shen X, Li O, Gao H. Paenibacillus tianmuensis sp. nov., isolated from soil. Int J Syst Evol Microbiol 2011; 61:1133-1137. https://doi.org/10.1099/ijs.0.024109-0 [PubMed].
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